French version



BioNLP Shared Task

Laboratoire Mathématique, Informatique et Génome,

Members of Bibliome research group

Permanent members

     Claire Nédellec. Senior research scientist in computer science, groupe leader

     Philippe Bessières Senior research scientist in bioinformatics

     Robert Bossy Research scientist in bioinformatics

Non permanent members

     Dialecti Valsamou. Master, research and software development December 2010 - February 2013. Project FSOV SAM : Genetic marker extraction for scientific papers.

     Frédéric Papazian. Master, software development February 2008 - September 2012. Quaero Project: IHM for KB systems. Visiting the Database Center for Life Science, Tokyo.

     Wiktoria Golik Master, Computational linguistics and Knowledge Acquisition August 2009 - May 2013. Quaero: Termino-ontology design.

     Pierre Warnier PhD student, computer science October 2010 - . Quaero: Distributional semantics.

     Zorana Ratkovic PhD student, Computational linguistics December 2010 - . Quaero: Acquisition of lexico-semantics structures.

Former members

     Alain Kotoujansky Senior research scientist in biology and information science

     Julien Jourde. Master, software development September 2008 - December 2012. Quaero: NER and renaming relation extraction.

     Paul Bui-Quang. Engineer school, research and ontology development February 2012 - August 2012. Project GIS GC HP2E : semantic search enfine for agriculture.

     Philippe Veber Research scientist in bioinformatics

     Audrey Lemaçon. Apprentice in Bioinformatics April 2008 - September 2010. Quaero project: Gene cocitation.

     Laurent Gillard. Researcher in computer science mai 2009 - avril 2011. Quaero: ML for IE.

     Sophie Aubin. Computational linguistics February 2008 - December 2009. Quaero Project: terminology design, content analysis.

     Sandra Makuntima. Engineer in Computational Linguistics September 2008 - July 2009. Quaero: terminology design.

     Sarhane Safraoui. Software Developer March 2008 - August 2008. Epipagri project, information system.

     Alain-Pierre Manine ASC bioinformatics, ML for IE

  • Brice Durot. Software Developer August 2007 - December 2007. Epipagri project: patent management.

  • Aïcha Bourgognon Research scientist in Biology. November 2006 - January 2007. Alvis project, acquisition of terminology in Bacteriology.

  • Jérôme Azé Research scientist in computer science. November 2004 - August 2005. Alvis project: Ontology Learning with Asium.

  • Erick Alphonse Post-doc. September 2003 - September 2005. ExtraPloDocs Project: Application of Inductive Logic Programming to relation extraction.

  • Gaël Deral Software Developer. December 2004 - May 2005. Alvis project: Machine Learning integration in Alvis semantic annotation pipeline.

  • Julien Gobeil Software Developer. January - April 2005. Alvis project: Data set and evaluation in LLL challenge.

  • Alain Lelu Visitor professor in computer science September 2002 - August 2004. Professor at the Computer Science Department of Besançon University. Document clustering.

  • Mohamed Ould Abdel Vetah. PhD student. 2001-2005. Document filtering and information extraction.

  • Gaëtan Lehman Software Developer. 2003. Named entity recognition and document filtering.

  • Sophie Aubin Graduate student in computational linguistic. 2002. Syntactic parsing.

  • Zihyu Qian Graduate student in computer science. 2002. Terminology impact on document filtering and ontology learning.